Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQ---FNLVHGSDSAESAQREIALWFPGA
2DXF Chain:A ((7-140))
-TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDP-KDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFF---
General information:
TITO was launched using:
RESULT:
Template:
2DXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81705 for 1012 contacts (-80.7/contact) +
2D Compatibility (PS) -14255 + (NN) -5277 + (LL) 232
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -120805.0 ( -119.37 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2DXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXF-query.scw
PDB file :
Tito_Scwrl_2DXF.pdb
: