Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGEDSIRSFPVPDLGEGLQEVTVTCWSVAVGDDVEINQTLCSVETAKAEVEIPSPYAGRIVELGGAEGDVLKVGAELVRIDTGPTAVAQPNGEGAVPTLVGYGADTAIETSRRTSRPLAAPVVRKLAKELAVDLAALQRGSGAGGVITRADVLAAARGGVGAGPDVRPVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVSAAP----EITPFALTLRLLVIALKHNVILNSTWVDSGEGPQVHVHRGVH-LGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVDDGVPVINHPEAAILGLGAIKPRP-VVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALLDL |
| 2II4 Chain:A ((35-261)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVKGFHKAMVKTMSAALK-IPHFGYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNAS-VD--ENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2II4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131693 for 1703 contacts (-77.3/contact) +
2D Compatibility (PS) -25244 + (NN) -15509 + (LL) 9508
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -180488.0 ( -105.98 by residue)
QMean score : 0.524
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