Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIVGVGIDLVSIPDFAEQVDQ----PGTVFAET---FTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIH-RDIEVVTDMWGRPRVRLTGAIAEYLADVTI---HVSLTHEGDTAAAVAILEAP
2JBZ Chain:A ((21-143))
MSIIGVGIDVAEVERFGAALERTPALAGRLFLESELLLPGGERRGVAS--------LAARFAAKEALAKALGA---------PAGLLWTDAEVWVEAGGRPRLRVTGTVAARAAELGVASWHVSLSHDAGIASAVVIAEG-
General information:
TITO was launched using:
RESULT:
Template:
2JBZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71510 for 804 contacts (-88.9/contact) +
2D Compatibility (PS) -12380 + (NN) -4964 + (LL) 1068
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -98236.0 ( -122.18 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2JBZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JBZ-query.scw
PDB file :
Tito_Scwrl_2JBZ.pdb
: