Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPVTGLHH
4KZS Chain:A ((35-84))
---------------------------------KGYLYGSGSATS-----------KEASKQKALADLVASISVVVNSQIHI-----------
General information:
TITO was launched using:
RESULT:
Template:
4KZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2826 for 176 contacts (-16.1/contact) +
2D Compatibility (PS) -4323 + (NN) -2494 + (LL) 3436
1D Compatibility (HY) -400 + (ID) 500
Total energy: -7107.0 ( -40.38 by residue)
QMean score : 0.058
(partial model without unconserved sides chains):
PDB file :
Tito_4KZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KZS-query.scw
PDB file :
Tito_Scwrl_4KZS.pdb
: