Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRDLAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVGKPFLTYTQQT-RAVADG---KPLHSETGYLR-VCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVGQPLQDHLAAVLHRQR
2FWV Chain:A ((72-161))
---------------VGVWRGEGEGRGPD-GDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVA----IELLLAHSAGYVELFYG---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6187 for 405 contacts (-15.3/contact) +
2D Compatibility (PS) -8005 + (NN) -1548 + (LL) 6072
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -16568.0 ( -40.91 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_2FWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWV-query.scw
PDB file :
Tito_Scwrl_2FWV.pdb
: