Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMK---LTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPAD-GVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
1S4M Chain:A ((1-282)) | -----------------------MVVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTI-SYPPEYFLP-DFPGLLMTVESRVEMLSRYARTVVL------DFFRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNASFLRKKGVEV-YEIEDVVVQGKR-------VSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIVHK---------FPTANIDRGNEKLVDLKRGVY----LVRVHLP------DGKKKFGVMNVGFRPT-DARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMID-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187326 for 2057 contacts (-91.1/contact) +
2D Compatibility (PS) -28301 + (NN) -4009 + (LL) 3572
1D Compatibility (HY) -24800 + (ID) 4750
Total energy: -245614.0 ( -119.40 by residue)
QMean score : 0.386
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