Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDLSQRLAGRVAVITGGGSGIGLAAGRRMRAEGATIVV---GDV----DVEAGGAAADELSGLFVPTDVCDEDAVNGLFDGAAETYGRIDIAFNNAGISPPEDNLIENTELAAWQRVQDVNLKSVYLCCRAALRHMVLAGKGSIVNTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKNPERAARRMV--HVPLGRFAEPDEIAAAVAFLASDDASFITASTFLVDGGISSAYVTPL
1X1T Chain:A ((2-259))
-------LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRT-----------------LLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA------
General information:
TITO was launched using:
RESULT:
Template:
1X1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146919 for 1945 contacts (-75.5/contact) +
2D Compatibility (PS) -24241 + (NN) -8519 + (LL) 2420
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -196359.0 ( -100.96 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_1X1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X1T-query.scw
PDB file :
Tito_Scwrl_1X1T.pdb
: