Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
3O8J Chain:A ((225-255)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVIAGTGSDVYSAIIGAIGALRGPKHGGANE---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3O8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5123 for 143 contacts (-35.8/contact) +
2D Compatibility (PS) -3245 + (NN) 320 + (LL) 20468
1D Compatibility (HY) -400 + (ID) 650
Total energy: 11370.0 ( 79.51 by residue)
QMean score : 0.024
|
|
|