Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLRLVSPIKAFADGIVAVAIAVVLMFGLANTPRAVAADERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAA--ANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS
3C73 Chain:A ((6-113))
-------------------------------------------FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLP----------TTFLINPEGKV--------------
General information:
TITO was launched using:
RESULT:
Template:
3C73.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63155 for 738 contacts (-85.6/contact) +
2D Compatibility (PS) -11368 + (NN) -6924 + (LL) 5964
1D Compatibility (HY) -8800 + (ID) 1450
Total energy: -85733.0 ( -116.17 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3C73.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C73-query.scw
PDB file :
Tito_Scwrl_3C73.pdb
: