Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLA---GLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPA--------GESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFSRAVITRWVQLPLAE-GSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
1H2F Chain:A ((4-204))
-------LYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVEL--AAIYTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDP--IAFDHFWQAPHLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYMYGTSVTIIEVDGGTFHVAVEGDVSHIEEV---
General information:
TITO was launched using:
RESULT:
Template:
1H2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84718 for 1490 contacts (-56.9/contact) +
2D Compatibility (PS) -20568 + (NN) -8762 + (LL) 436
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -125362.0 ( -84.14 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1H2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H2F-query.scw
PDB file :
Tito_Scwrl_1H2F.pdb
: