Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
4UNP Chain:A ((1-210))
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAV---------------------------AELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPP----
General information:
TITO was launched using:
RESULT:
Template:
4UNP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120269 for 1504 contacts (-80.0/contact) +
2D Compatibility (PS) -20577 + (NN) -15579 + (LL) 904
1D Compatibility (HY) -23600 + (ID) 9150
Total energy: -188271.0 ( -125.18 by residue)
QMean score : 0.843
(partial model without unconserved sides chains):
PDB file :
Tito_4UNP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UNP-query.scw
PDB file :
Tito_Scwrl_4UNP.pdb
: