Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLI-----DHPVRPRRLGDLLPDAFGLDDLPRERR
1JTK Chain:A ((6-131))
--------LITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDLH----
General information:
TITO was launched using:
RESULT:
Template:
1JTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83978 for 902 contacts (-93.1/contact) +
2D Compatibility (PS) -13396 + (NN) -6799 + (LL) 796
1D Compatibility (HY) -7600 + (ID) 2250
Total energy: -113227.0 ( -125.53 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_1JTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JTK-query.scw
PDB file :
Tito_Scwrl_1JTK.pdb
: