Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLG--------DALHATAVRILTGLTDECVAVRAIRR-LQMSCLDLCIGQFEDCLLEGQ-PEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVA-ALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCA---DERIQAAIAALPDAVRSPDLIALSQLICRREC |
4GP2 Chain:A ((43-320)) | ------------------------------------------------------------------TGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFA-KEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEILAREVVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133986 for 2114 contacts (-63.4/contact) +
2D Compatibility (PS) -28852 + (NN) -23077 + (LL) 6120
1D Compatibility (HY) -11200 + (ID) 4500
Total energy: -195495.0 ( -92.48 by residue)
QMean score : 0.456
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