Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPIGHPAA--IALADDAPIITPINSEFGKANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRY---DYVTTKPLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGD-FVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
| 1GQW Chain:A ((4-278)) | ---RLSITPLGPYIGAQISGAD--RPLSDNQFEQLYHAVLRHQVVFLRDQ-AITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLL--HPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKP-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90895 for 2167 contacts (-41.9/contact) +
2D Compatibility (PS) -29333 + (NN) -14181 + (LL) 1640
1D Compatibility (HY) -12800 + (ID) 5250
Total energy: -150819.0 ( -69.60 by residue)
QMean score : 0.462
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