Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLAD-VQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALG---DMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR |
| 4WR3 Chain:A ((4-357)) | -----------------------------------ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADA--FGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEA--SLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQC--KNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQ------RSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGFGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKA-GDPVILWGEGLPVERIAE----MTKVSAYELITRLTSRVAMKY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199138 for 2998 contacts (-66.4/contact) +
2D Compatibility (PS) -37845 + (NN) -11584 + (LL) 3324
1D Compatibility (HY) -21200 + (ID) 6600
Total energy: -273043.0 ( -91.08 by residue)
QMean score : 0.391
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