Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWNHQSVEIAVRRTTVPSPNLPPGFDFTDPAIYAERLPVAEFAELRSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQVSCELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK--KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERLRSGWLNGIKHWQVDYTGRCPVAH |
| 4L0E Chain:A ((28-426)) | ---------------TLPIPDDISTINLTDPRTYEVNDLSEYWRQLRTTRPLYWH---PPVGDA---PGFWVVSRYADVMALYKDNKKLTSEKGNVLVTL---LAGGDSAAGKMLAVT-DGAMHRGLRNVLLKSFSPQALKPIVDQIRVNTTRLVVDAARRGECDFAADVAEQIPLNTISDLLGVPAADREFLLKLNKSALSSE--DQSATDAWLARNEILLYFSELVAERRAKPTEDVISVLANSMVDGKPLTEEVIVLNCYSLILGGDETSRLSMIDSVQTFTQYPDQWELLRDGKVTLESATEEVLRWATPAMHFGRRAVTDMELHGQVIAAGDVVTLWNNSANRDEEVFADPYAFDLNRSPNKHITF-GYGPHFCLGAYLGRAEVHALLDALRTYTTGFEITGEPQRIHSNFLTGLSRLPV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188876 for 3238 contacts (-58.3/contact) +
2D Compatibility (PS) -42514 + (NN) -23820 + (LL) 1472
1D Compatibility (HY) -27200 + (ID) 6100
Total energy: -287038.0 ( -88.65 by residue)
QMean score : 0.518
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