Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVD-ANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
3N9W Chain:A ((6-223))
------DVCAVVPAA------------------NQTILEHSVHALLAHPRVKRVVIAI---------PLANHPQITVVDGGDERADSV---LAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNE--GATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAE-----
General information:
TITO was launched using:
RESULT:
Template:
3N9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129560 for 1481 contacts (-87.5/contact) +
2D Compatibility (PS) -20565 + (NN) -8080 + (LL) 2548
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -168957.0 ( -114.08 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3N9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N9W-query.scw
PDB file :
Tito_Scwrl_3N9W.pdb
: