Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRWSAETRLALVRRARRMNRALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPVK------VEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPLVQGPETDHLLALAGL
1RRS Chain:A ((39-235))
---------------------------------------PYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYY-SRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVT-DDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEEL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1RRS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100383 for 1414 contacts (-71.0/contact) +
2D Compatibility (PS) -19307 + (NN) -11884 + (LL) 5216
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -141758.0 ( -100.25 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1RRS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RRS-query.scw
PDB file :
Tito_Scwrl_1RRS.pdb
: