Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDME---------VGAGTFHTATFLRAIGPETW-NAAYVQPSRRP----TD----GRYGENPNRLQHYYQFQVVLKPNPE-----NFQELYLGSLKA---IGIDPLV------------------------HDIRF----------VEDNWESPTLGAWGLGWEIWL-------------------NGMEVTQFTYFQ--Q--VGG-IECYPVTGEITYGLERLAMYLQGVDSVYDL-VWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANVPKLFELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARAVAQSYLQARARLGFPMATPELRDEVLAKLKEAE |
3HY0 Chain:A ((1-264)) | -------SKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTA------RHHTFFEMLGNFSFGDYFKLDAILFAWLLLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTAMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85870 for 1303 contacts (-65.9/contact) +
2D Compatibility (PS) -19145 + (NN) -4958 + (LL) 488
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -114735.0 ( -88.05 by residue)
QMean score : 0.343
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