Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART
3MA5 Chain:A ((59-129))
--------------EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKLKAEGLE-
General information:
TITO was launched using:
RESULT:
Template:
3MA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3622 for 485 contacts (-7.5/contact) +
2D Compatibility (PS) -8356 + (NN) -8004 + (LL) 1432
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -22700.0 ( -46.80 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_3MA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MA5-query.scw
PDB file :
Tito_Scwrl_3MA5.pdb
: