Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFLADRDWLAGQP |
| 3DWR Chain:B ((9-309)) | MSLAVEAVKDFLLKLQDDICEALEAEDGQATFVEDKWT-----GGRTRVMVDGAVIEKGGVNFSHVYG----------------CNFEAMGVSLVIHPKNPHVPTSHANVRLFVA-----EPVWWFGGGFDLTPYYAVEEDCRDFHQVAQDLCKPFGADVYARFKGWCDEYFFIPYRNEARGIGGLFFDDLNEWPFEKCFEFVQAVGKGYMDAYIPIVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSGGRTESILISLPPRARWGYNWQPEPGTPEARLTEYFLTKRQWV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152200 for 2295 contacts (-66.3/contact) +
2D Compatibility (PS) -29487 + (NN) -12476 + (LL) 196
1D Compatibility (HY) -35600 + (ID) 9900
Total energy: -239467.0 ( -104.34 by residue)
QMean score : 0.456
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