Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITS-----ANGHSSWEGWVDDHYASEKLNDPAAVANLVGRY-DPSKSIRDLLTQTGQVAYARPEP-L------------YDTS----YETR-LRVAKELIPESIALTVTVLTKGANSFDAPTAL |
| 1AH7 Chain:A ((109-244)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTDGNG------YWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFDTYGDR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AH7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15241 for 677 contacts (-22.5/contact) +
2D Compatibility (PS) -11519 + (NN) -4009 + (LL) 13444
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -23075.0 ( -34.08 by residue)
QMean score : 0.193
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