Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGWSDIAVTNATAAFLLESLGYQV-KIDTLSVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVERLGRNLDGT------------RFTLAVPRYVWDAGVHRFEDLAAQGQRFNRKLYGIGSGAPANQSIQKMIDANQFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPH----------------------PMNIRHDLRYLEGGEQYFGDRGQVYTLARKGYAAQCPNPARLLANLRF---DLDMENRLMSDALEGTATPASATRAWLKANPRVLEAWLQGVTSRDGGDALAAVRGQP |
1R9L Chain:A ((31-302)) | --------------------------------------------------LEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKA---DLTGCNPGWGCEGAINHQLAAYEL-TNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTK-LPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57337 for 1634 contacts (-35.1/contact) +
2D Compatibility (PS) -24858 + (NN) -5174 + (LL) 3828
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -93691.0 ( -57.34 by residue)
QMean score : 0.328
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