Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLG-IDEPDLARLEHFIGPPLLQCFMQTYGFDEARAWEAVNHYRERFR-----VTGLYENRV------------------FDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
2HI0 Chain:A ((3-224))
------KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAILGE
General information:
TITO was launched using:
RESULT:
Template:
2HI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115826 for 1625 contacts (-71.3/contact) +
2D Compatibility (PS) -21910 + (NN) -12391 + (LL) 840
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -163637.0 ( -100.70 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_2HI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HI0-query.scw
PDB file :
Tito_Scwrl_2HI0.pdb
: