Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
| 1COI Chain:A ((1-29)) | -----------------------------------------------------------------------------------------------------------------EVEALEKKVAALESKVQALEKKVEALEHG------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1COI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1102 for 108 contacts (10.2/contact) +
2D Compatibility (PS) -3379 + (NN) -4036 + (LL) 9320
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 1357.0 ( 12.56 by residue)
QMean score : 0.342
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