Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKLIVALFGLLLAACSSSPPETPPTRVVIWLHAAPNLNPSAAGQAAPLRLRLY--ELKKDTAFGRADYFALTDNAQSTLG----GDLVEQDEFLLRPGEERRIERTLDEQTRQLGFVAAYRDLDRATWRQVLDVPGQRTSHLDITLGAQAIGIVARPAP |
1IPK Chain:A ((301-384)) | -----------------------------------------------PLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYFVDA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4654 for 327 contacts (14.2/contact) +
2D Compatibility (PS) -7647 + (NN) 2492 + (LL) 4696
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: 1095.0 ( 3.35 by residue)
QMean score : 0.054
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