Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MANEVYANNMEISCKAANGKSIAAFPDVCFTPPQAPPTPLGVPIPYPNTGLSKDTTKGTRT-IRIT----RKEVMLKNKSYYKTSYGDEPGRAPKKGIVTSKIKGKVYFTSWSMNVKFESKNVVRHLD-------LTTHNHASFPG----NTPVWPYLDQATVDAGGGPCSNE-----------VKKEKKDCADFKPHGSKDACAGLGAGKPSGKKTSNEADRLADKVAARKCLTARRCALQPYKPNSCCPQQTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTHGLMHTFQSAAAAKSRSGTLQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKECLSAQLDNYHKQCGINARTPIKAVETGQTDVTAATQAIKTRNARLGATRSRVR------------------------------- |
| 4XR7 Chain:B ((1-456)) | MHSLLQYRSADQLFIPNNIREDLTKKNLSILQVFPSSGKVIPSIVQ---DYFNLVPLNFNNKTTLFKVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQTTKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVLITGDPGRIKLSHCNFMDLLFN--DDTDTVVSSTIEGQQQLDYKYLGELLFNLSINIENSNNNTA-PKEYRLEEITPQSIDD----------MRQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRL-VNKLNCIFGRIESRID-INWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSITQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 58496 for 2295 contacts (25.5/contact) +
2D Compatibility (PS) -38539 + (NN) -4529 + (LL) -192
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: 1386.0 ( 0.60 by residue)
QMean score : 0.213
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