Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
| 2WWB Chain:B ((30-51)) | ------------------------------------------------------------------------------------------------------------------------------------RKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1075 for 83 contacts (-13.0/contact) +
2D Compatibility (PS) -2272 + (NN) 560 + (LL) 10236
1D Compatibility (HY) -800 + (ID) 250
Total energy: 6399.0 ( 77.10 by residue)
QMean score : -0.573
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