Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISRPSLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFIVGIVAQSAGAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSVSEQIGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGARLNIDLRLPQV
4U0Y Chain:A ((18-77))
----------IMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVS-------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4U0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47087 for 363 contacts (-129.7/contact) +
2D Compatibility (PS) -6660 + (NN) -2760 + (LL) 14344
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -46813.0 ( -128.96 by residue)
QMean score : 0.764
(partial model without unconserved sides chains):
PDB file :
Tito_4U0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0Y-query.scw
PDB file :
Tito_Scwrl_4U0Y.pdb
: