Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTGLRYLPLAEATAVNFLAPLLVTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLTRMLANSDSPTTSNFLAGIFNT--LIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLT--QAFRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALLGILVICASGLVVAWRRGR |
4OHC Chain:A ((10-230)) | --TGYDRQSISDTTAKILLEVQAVHF---NAEKPFIFTSGWASPVYI-DCRKLISY---------------PRVRRALMEMAETTITRDIGF---EQIDAVAGGETAGIPF-AAWIADRMMVP---------------------MQYVRKKPKGFGRNA--QIEGHLEEGSRVLLVEDLTT-DSRSKINFVNALRTAGATVNHCFVLFHYN----IFKESVSVLKDIDVDLHALATWWDVLRVAKAS-------GYFETKTLDEVEKFLHAPAEWSA---------------AHGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221511 for 1748 contacts (-126.7/contact) +
2D Compatibility (PS) -22827 + (NN) -5301 + (LL) 7256
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -250133.0 ( -143.10 by residue)
QMean score : 0.239
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