Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNLSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALT-RHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSL-GGIVGQWLALHAPQRIERLV-LANTSAWLGPAAQWDERIAAVLQAEDMSE---TAAGFLGNWFPPAL-LERAEPV-----VERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTA-ASHGELIAASIAGARL-VTLPAVHLSNVEFPQAFEGAVLSFLGAA |
3T52 Chain:A ((1-269)) | ----STFVAKDGTQIYFK-DWGSGKPVL-FSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLK-ATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145380 for 2233 contacts (-65.1/contact) +
2D Compatibility (PS) -26965 + (NN) -7930 + (LL) 324
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -201451.0 ( -90.22 by residue)
QMean score : 0.388
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