Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYALLSLLATGTLLAQGAWAEDPEVLFKNKGCVACHAIDTKMVGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNA-VSDDEAQTLAKWVLSQK
4JCG Chain:A ((4-81))
---------------------------LAKKNNCIACHQVETKVVGPALKDIAAKYADKDDAATYLAGKIKGGSSGVWGQIPMPPNVNVSDADAKALADWILTLK
General information:
TITO was launched using:
RESULT:
Template:
4JCG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21443 for 518 contacts (-41.4/contact) +
2D Compatibility (PS) -8460 + (NN) -4733 + (LL) 2192
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -42644.0 ( -82.32 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_4JCG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JCG-query.scw
PDB file :
Tito_Scwrl_4JCG.pdb
: