Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
3TW2 Chain:A ((16-126))
-DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
General information:
TITO was launched using:
RESULT:
Template:
3TW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94138 for 765 contacts (-123.1/contact) +
2D Compatibility (PS) -12401 + (NN) -10175 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -130456.0 ( -170.53 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3TW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TW2-query.scw
PDB file :
Tito_Scwrl_3TW2.pdb
: