Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTLAPESTRQNLRSQRLNLLTNEPHQRLESLV---KSKEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARL---FPGLASRARDDAARADLADLGHPVPEGDQSVREA------------DLSLAEALGWLFVS-EGSKLGAAFLFKKA-AALELDE-NFGARHLAEPEGGRAQGWK-SFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA
1N45 Chain:A ((10-218))
----------PQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQE
General information:
TITO was launched using:
RESULT:
Template:
1N45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19091 for 1287 contacts (-14.8/contact) +
2D Compatibility (PS) -20588 + (NN) -11851 + (LL) 592
1D Compatibility (HY) -1200 + (ID) 1900
Total energy: -54038.0 ( -41.99 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1N45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N45-query.scw
PDB file :
Tito_Scwrl_1N45.pdb
: