Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLALK--RLSEIPLRLDIVRASTE------PGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVLDDVSRFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ
3CI0 Chain:J ((10-159))
------------------------------------------------------QKLNLMQQTMSFLTHDLTQMMPRPVRGD--QGQ-------REPA-LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGS-VKPTMQKLIP-ADSLRLQFYDG-TRWQESWSSVQAIPVAVRMTLHSPQ-WG--EIERIWLLR
General information:
TITO was launched using:
RESULT:
Template:
3CI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33770 for 1025 contacts (-32.9/contact) +
2D Compatibility (PS) -15163 + (NN) -8603 + (LL) 5500
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -56686.0 ( -55.30 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_3CI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CI0-query.scw
PDB file :
Tito_Scwrl_3CI0.pdb
: