Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHLGLEALGGTLPLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVFAWAPLHRLHHIRYGRAGDVNFALFFSVWDRLLGTALHRPDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQPPEGLGRSAGQA |
2DCH Chain:X ((10-33)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSSGL----VPRGSHMKVWDYLCGLIAADGHLDEEGYITILQKDRRFIDKIVALLKSAEIKISSLFYDKGAGVWKIKVKDER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3774 for 86 contacts (-43.9/contact) +
2D Compatibility (PS) -2287 + (NN) 1069 + (LL) 18604
1D Compatibility (HY) 0 + (ID) 350
Total energy: 13262.0 ( 154.21 by residue)
QMean score : -0.288
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