Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQFLKLVHADKLTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDKIKPELIKLYTTNFTESELKDLNAFYQSPL-GKKVLEKMPRLTAESAQLTQAKLQGAVEPVNKLMADMDKELGVAAPAQKKK |
1JCH Chain:C ((370-435)) | ---------------------------------------------------------------------------------------------------------------------AEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12209 for 299 contacts (40.8/contact) +
2D Compatibility (PS) -7201 + (NN) -4083 + (LL) 9712
1D Compatibility (HY) 0 + (ID) 1050
Total energy: 9587.0 ( 32.06 by residue)
QMean score : 0.348
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