Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPP-SAAELKAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA
1Z3E Chain:A ((3-115))
---VTLYTSPSCTSCRKARAWLEEHEI-PFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLP
General information:
TITO was launched using:
RESULT:
Template:
1Z3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66353 for 763 contacts (-87.0/contact) +
2D Compatibility (PS) -12465 + (NN) -7987 + (LL) 404
1D Compatibility (HY) -8800 + (ID) 1350
Total energy: -96551.0 ( -126.54 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3E-query.scw
PDB file :
Tito_Scwrl_1Z3E.pdb
: