Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQCSGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALYRKPEEVNRPC |
4YLT Chain:A ((7-315)) | -------GTGSYLPVQVRSNADLEKMVDTSDEWIVTRTGIRERRIAGLDETVATMGFQAAEKALEMAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGIKDAASFDLAAACAGFTYALSVADQYVKSGAVKHAIVIGSDVLSRALDPEDRG--TIILFGDGAGAVVLGASE--QPGIMSTHLHADGRYGELLALPYP----PAYV------------TMAGNEVFKVAVTELAHIVDETLQVNNLDRTALDWLVPHQANLRIISATAKKLGMGMDKVVITLDRHGNTSAASVPSAFDEAVRDGRIQRGQLVLLEAFGGGFTWGSALVRF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -300027 for 2894 contacts (-103.7/contact) +
2D Compatibility (PS) -32410 + (NN) -13389 + (LL) 868
1D Compatibility (HY) -17600 + (ID) 6100
Total energy: -368658.0 ( -127.39 by residue)
QMean score : 0.508
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