Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIHNLNHVNMFLQVIASGSISSAARILRKSHTAVSSAVSNLEIDLCVELVRRDGYKVEPTEQALRLIPYMRSLLN-YQQLIGDIAFNLNKGPRNLRVLLDTAIPPSFCDTVSSVLLDDFN--MVSLIRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQCVLGYTKAFVVAHPQH------PLCNASLHSIASLANYRQISLGSRSGQHSNLLRPVSDKVLFVENFDDMLR-LVEAGVGWGIAPHYFVEERLRNGTLA-VLSELYEPGGIDTKVYCYYNTALESERSFLRFLESARQRLRELGRQRFDDAPAWQPSIVETAQRRSGPKALAYRQRAAPE |
| 3T1B Chain:B ((2-285)) | ----KLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSELTKRMMMPMFNAFMEKYPDIHIELMMSNQAD-L-----DPTEWDVIFRVGPQRDSSLIARKI-GEVKDILVASPQYLSSHPQPTHAEELHQHQLLKGYPLLKWQLTNSQGETVVN--SDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154678 for 1949 contacts (-79.4/contact) +
2D Compatibility (PS) -28698 + (NN) -5616 + (LL) 4096
1D Compatibility (HY) -16800 + (ID) 2950
Total energy: -204646.0 ( -105.00 by residue)
QMean score : 0.344
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