Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIAN----TRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATC---AAAYRD----ALPDSVEPEEGRR-----IEP-PRCP--ACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
4F4U Chain:A ((16-272))
-----KFFAKAKHIVIISGAGVSAESGVPTF-----GYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEALA-----
General information:
TITO was launched using:
RESULT:
Template:
4F4U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143856 for 1899 contacts (-75.8/contact) +
2D Compatibility (PS) -25357 + (NN) -13372 + (LL) 1344
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -203641.0 ( -107.24 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_4F4U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F4U-query.scw
PDB file :
Tito_Scwrl_4F4U.pdb
: