Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLYNGRTEEGLPIEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAE----LQKHKPECWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCGA-------------------ESGGLEEHLHGQLPPRC--AACGGVLRPPVVLFEEMLPEEAIDTLYRELRKGFDAVLVVGTTA-SFP-YIVEPVLRTRQAGGFTAEVNPGVTDLSERVDVKMTGRALDIMPQVVSHIYR |
| 4F4U Chain:A ((9-273)) | ----SSMADFRKFFAKAKHIVIISGAGVSAESGVPTF----GYWRKWQAQDLATPLAFA-----HNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGT--KNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAH-CDLCLVVGTSSVVYPAAMFAPQVAAR--GVPVAEFNTETTPATNRFRFHFQGPCGTTLPEALA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125737 for 1869 contacts (-67.3/contact) +
2D Compatibility (PS) -25612 + (NN) -12435 + (LL) 788
1D Compatibility (HY) -17200 + (ID) 4350
Total energy: -184546.0 ( -98.74 by residue)
QMean score : 0.464
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