Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVGLERFEILVDD--GDRLHRRLYL-PG---LVVEDEVVLK-A-PDSAHYSIKPSAEV-AGGSLDMTIEEPEP-GS--LFVRFAYCTRYLQP-LGDELPYDAFVKQAYIAMDVETIATIRDRFGASAASGS |
| 3K3K Chain:A ((61-198)) | --------------------PPELVWSIVRRF-DKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRFEKENRIWTVVLESYVVDMPEGNSE--D----DTRMFADTVVKLNLQKLATVAEAMARNSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52416 for 816 contacts (-64.2/contact) +
2D Compatibility (PS) -13208 + (NN) 1139 + (LL) 2172
1D Compatibility (HY) 800 + (ID) 600
Total energy: -62113.0 ( -76.12 by residue)
QMean score : 0.230
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