Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPREHGKRSIDNETRSALKRQRPAVIWLTGLSGAGKSTIASALELALFEQKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSREL---IGIEHFIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA
2AX4 Chain:A ((21-191))
----------------------RGCTVWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITSFISPFAKDRENARKIHESAGLP-FFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIV
General information:
TITO was launched using:
RESULT:
Template:
2AX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101520 for 1340 contacts (-75.8/contact) +
2D Compatibility (PS) -18888 + (NN) -12324 + (LL) 1124
1D Compatibility (HY) -13200 + (ID) 4300
Total energy: -149108.0 ( -111.27 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_2AX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AX4-query.scw
PDB file :
Tito_Scwrl_2AX4.pdb
: