Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNV-FSLLLAREARLLFRRPAELANPLVFFAI----VIALFPLAVG-----------------PESQLLQTLS----------PGLVWVAALLAVLLSLEGLFRSDFEDGSMEQ--------WVLSPHPLALLVLA-----------KVLAHWLFSGLALVLMSPLFALMLGLPARCIPVLLLSLLLGTPVLSLLGAVGAALTVGLKRGGLLLALLILPL---------------------------YIPVLILGSGALQASLQGLPSSGHLLWLASLTALALTLTPFAIAAGLKISVGE---------------------------- |
| 3DLZ Chain:A ((29-357)) | KGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFSSATDLLCQHSLFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241871 for 1617 contacts (-149.6/contact) +
2D Compatibility (PS) -23428 + (NN) 1372 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -271077.0 ( -167.64 by residue)
QMean score : 0.045
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