Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQR-GQPIDGIVYDITRSLARQV-G--RKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA-PIPEALPAQRIGTVLGYSYPR-LQALFDIGR--LRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 2V25 Chain:A ((33-258)) | --------------------------------------------------------------SIKSKGQLIVGVK-NDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVI-ATFTITPERKRIYNFSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDK----SEILPDSFEPQSYGIVTKKDDPAFAKYVDDFVKEHKN--EIDALAKKWG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149864 for 1785 contacts (-84.0/contact) +
2D Compatibility (PS) -23178 + (NN) -6804 + (LL) 5080
1D Compatibility (HY) -1600 + (ID) 1300
Total energy: -177666.0 ( -99.53 by residue)
QMean score : 0.385
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