Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLPRAS
4EQA Chain:A ((6-148))
-----QCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASC------
General information:
TITO was launched using:
RESULT:
Template:
4EQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101345 for 1215 contacts (-83.4/contact) +
2D Compatibility (PS) -15376 + (NN) -2936 + (LL) 428
1D Compatibility (HY) -19600 + (ID) 7150
Total energy: -145979.0 ( -120.15 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_4EQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EQA-query.scw
PDB file :
Tito_Scwrl_4EQA.pdb
: