Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRA-----RGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAE-GVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ |
2ZTV Chain:A ((2-260)) | --LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148928 for 2173 contacts (-68.5/contact) +
2D Compatibility (PS) -27216 + (NN) -7185 + (LL) 184
1D Compatibility (HY) -22400 + (ID) 7900
Total energy: -213445.0 ( -98.23 by residue)
QMean score : 0.520
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