Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
2RJB Chain:A ((12-52))
-------------------EQFSQAMSAMYQQE-------------------
General information:
TITO was launched using:
RESULT:
Template:
2RJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3245 for 46 contacts (-70.5/contact) +
2D Compatibility (PS) -1628 + (NN) -1668 + (LL) 2284
1D Compatibility (HY) -400 + (ID) 150
Total energy: -4807.0 ( -104.50 by residue)
QMean score : -0.018
(partial model without unconserved sides chains):
PDB file :
Tito_2RJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RJB-query.scw
PDB file :
Tito_Scwrl_2RJB.pdb
: