Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS
3US6 Chain:A ((81-132))
--FKGSSASIGAQRVKNSCVAFRNFCEEQNI---DACRRCLQQVKQEYLLVKNKLET--------------------
General information:
TITO was launched using:
RESULT:
Template:
3US6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5519 for 313 contacts (-17.6/contact) +
2D Compatibility (PS) -5800 + (NN) -4315 + (LL) 1048
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -16936.0 ( -54.11 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3US6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3US6-query.scw
PDB file :
Tito_Scwrl_3US6.pdb
: